Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEY-LRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
2QNW Chain:A ((29-46)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------PESNFIKDLDADSLDSVE--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287 for 56 contacts (-5.1/contact) +
2D Compatibility (PS) -1756 + (NN) -1211 + (LL) 14268
1D Compatibility (HY) 0 + (ID) 200
Total energy: 10814.0 ( 193.11 by residue)
QMean score : -0.075
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