Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
3UEV Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMEN----EQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
3UEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108178 for 1195 contacts (-90.5/contact) +
2D Compatibility (PS) -16138 + (NN) 3955 + (LL) 1920
1D Compatibility (HY) -24000 + (ID) 7900
Total energy: -150341.0 ( -125.81 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_3UEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UEV-query.scw
PDB file :
Tito_Scwrl_3UEV.pdb
: