Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
2G79 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGELILTMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
2G79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38614 for 991 contacts (-39.0/contact) +
2D Compatibility (PS) -15320 + (NN) -4332 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 6300
Total energy: -82758.0 ( -83.51 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2G79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G79-query.scw
PDB file :
Tito_Scwrl_2G79.pdb
: