Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGAAAHSISPRAVWQFRNMIKCTIPGSDPLKDYNNYGCYCGLGGWGTPVDDLDRCCQTHDHCYSQAKKLESCKFLIDNPYTNTYSYSCSGSEITCSAKNNKCEDFICNCDREAAICFSKVPYNKEYKNLDTGKFC
2B04 Chain:A ((1-124))
----------------------ALWQFRSMIKCAIPG------FNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
2B04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64613 for 846 contacts (-76.4/contact) +
2D Compatibility (PS) -12556 + (NN) -6572 + (LL) 2144
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -101797.0 ( -120.33 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_2B04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B04-query.scw
PDB file :
Tito_Scwrl_2B04.pdb
: