Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
1JAH Chain:A ((1-166))
MTEYKLVVVGAPGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAGRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1JAH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99656 for 1335 contacts (-74.6/contact) +
2D Compatibility (PS) -18642 + (NN) -9557 + (LL) 1972
1D Compatibility (HY) -22800 + (ID) 7750
Total energy: -156433.0 ( -117.18 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1JAH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JAH-query.scw
PDB file :
Tito_Scwrl_1JAH.pdb
: