Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA
3GEP Chain:B ((3-217))---RSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEM---HIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGG-DLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA


General information:
TITO was launched using:
RESULT:

Template: 3GEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178813 for 1620 contacts (-110.4/contact) +
2D Compatibility (PS) -23384 + (NN) -12854 + (LL) 28
1D Compatibility (HY) -34400 + (ID) 10450
Total energy: -259873.0 ( -160.42 by residue)
QMean score : 0.696

(partial model without unconserved sides chains):
PDB file : Tito_3GEP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GEP-query.scw
PDB file : Tito_Scwrl_3GEP.pdb: