Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPLLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPQGAHFLAKSLDDALKLIEQPELASKVDMVWVVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLEKYKLLPEYPGVLSEIQEEKGIKYKFEVYEKKD
2W3M Chain:A ((2-187))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 2W3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120123 for 1357 contacts (-88.5/contact) +
2D Compatibility (PS) -19923 + (NN) -7672 + (LL) 208
1D Compatibility (HY) -26000 + (ID) 8350
Total energy: -181860.0 ( -134.02 by residue)
QMean score : 0.711

(partial model without unconserved sides chains):
PDB file : Tito_2W3M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W3M-query.scw
PDB file : Tito_Scwrl_2W3M.pdb: