Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLL---ENKASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLD---LLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYY-DKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 3MDZ Chain:A ((26-280)) | ----------------------WGYGQDDGPSHWHKLYPI-----AQGDRQSPINIISSQAVYSPSLQPLELS-YEACMSLSITNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHWNAKKYS-TFGEAASAPDGLAVVGVFLETGDE-HPSMNRLTDALYMV---RFKGTKAQFSCFNPKCLLPAS---RHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTSEDDERIHMVNNFRPPQPLKGRVVKAS---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82484 for 1999 contacts (-41.3/contact) +
2D Compatibility (PS) -26441 + (NN) -7493 + (LL) 3792
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -136476.0 ( -68.27 by residue)
QMean score : 0.335
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