Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
1KLY Chain:A ((11-222))
----------VMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIAGFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESI------
General information:
TITO was launched using:
RESULT:
Template:
1KLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186206 for 1875 contacts (-99.3/contact) +
2D Compatibility (PS) -22987 + (NN) -6151 + (LL) 1040
1D Compatibility (HY) -30400 + (ID) 10500
Total energy: -255204.0 ( -136.11 by residue)
QMean score : 0.807
(partial model without unconserved sides chains):
PDB file :
Tito_1KLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KLY-query.scw
PDB file :
Tito_Scwrl_1KLY.pdb
: