Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVST-GSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN |
4HKP Chain:A ((70-311)) | ---------------PVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLH---RGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMKPE---FLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAA-DRLEAAEMYRKAAWEAYLSRLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163814 for 2087 contacts (-78.5/contact) +
2D Compatibility (PS) -25377 + (NN) -3489 + (LL) 976
1D Compatibility (HY) -27200 + (ID) 6450
Total energy: -225354.0 ( -107.98 by residue)
QMean score : 0.670
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