Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS
4DAT Chain:A ((4-234))
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQ----------GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLK-KGDYYRYLAEVAT---KKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT-----------------
General information:
TITO was launched using:
RESULT:
Template:
4DAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76627 for 1651 contacts (-46.4/contact) +
2D Compatibility (PS) -23216 + (NN) -9389 + (LL) 228
1D Compatibility (HY) -28800 + (ID) 10850
Total energy: -148654.0 ( -90.04 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_4DAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DAT-query.scw
PDB file :
Tito_Scwrl_4DAT.pdb
: