Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
2ZKN Chain:A ((1-134))
-ASGLVASNLNLKPGESLRVRGEVAPDAKSFVLNLGKDSNNLSLHFNPRFNAHGDANTIVSNSKDGGAWGTEQREAVFPFQPGSVAEVSITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKSVAFD
General information:
TITO was launched using:
RESULT:
Template:
2ZKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75780 for 1034 contacts (-73.3/contact) +
2D Compatibility (PS) -14149 + (NN) -2857 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 6400
Total energy: -112578.0 ( -108.88 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2ZKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZKN-query.scw
PDB file :
Tito_Scwrl_2ZKN.pdb
: