Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
1RZY Chain:A ((13-126))
------------PGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
1RZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81893 for 812 contacts (-100.9/contact) +
2D Compatibility (PS) -12540 + (NN) -10405 + (LL) 1492
1D Compatibility (HY) -15200 + (ID) 5450
Total energy: -123996.0 ( -152.70 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_1RZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZY-query.scw
PDB file :
Tito_Scwrl_1RZY.pdb
: