Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
1BSK Chain:A ((1-166))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA--
General information:
TITO was launched using:
RESULT:
Template:
1BSK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86245 for 1277 contacts (-67.5/contact) +
2D Compatibility (PS) -17482 + (NN) -89 + (LL) 452
1D Compatibility (HY) -24000 + (ID) 8300
Total energy: -135664.0 ( -106.24 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_1BSK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BSK-query.scw
PDB file :
Tito_Scwrl_1BSK.pdb
: