Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHAGRTGYDNREIVMKYIHYKLSQRGYEWDA-GDV----GAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGPSMRPLFDFSWLSLKTLLSLALVGACITLGAYLGHK
1BXL Chain:A ((9-200))
----------NRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESE----------------------------------------------AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109247 for 1096 contacts (-99.7/contact) +
2D Compatibility (PS) -15365 + (NN) -5365 + (LL) 3412
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -149115.0 ( -136.05 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_1BXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BXL-query.scw
PDB file :
Tito_Scwrl_1BXL.pdb
: