Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRP-------LFRWQLCPGWPVLAQLAVGSALFSIVVPVLAPGLGSTRSSA-LCSLGYCVWYGSAFAQALLLGCHASL--GHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGASGGLCTLIYSTELKAL-QATHTVACLAIFVLLPLGLFGAKGLKKALGMGP----GPWMNILWAWFIFWW----PHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
| 3MKU Chain:A ((210-410)) | -------------------------------------------------------------LLFYIVTS--KRLAHVKVFETFHKPQPKELIRLFRL----GFPVAAALFFEVTLFAVVALLVAP-LGSTVVAAHQVALNFS---SLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVG---------LMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -101288 for 1191 contacts (-85.0/contact) +
2D Compatibility (PS) -18211 + (NN) -2945 + (LL) 6284
1D Compatibility (HY) -15600 + (ID) 2900
Total energy: -134660.0 ( -113.06 by residue)
QMean score : 0.036
|
|
|