Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHG-WVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPSQSGVGKP--CWIICFCVWMAAILLSIPQLVFYTV---NDNARCIPIF--PRYLGTSMKALIQMLEICI---GFVVPFLIMGVCYFI------TARTL--MKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI |
| 5C1M Chain:A ((25-293)) | ------------------------------------------------SIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE------NLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKAL-ITIPETTFQTVSWHFCIALGYT------NSCLNPVLYAFLDENFKRCF------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208666 for 1793 contacts (-116.4/contact) +
2D Compatibility (PS) -25110 + (NN) 78 + (LL) 7208
1D Compatibility (HY) -28400 + (ID) 4500
Total energy: -259390.0 ( -144.67 by residue)
QMean score : 0.147
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