Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANFTPVNGSSGNQSVRLVTSSSH---NRYETVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYIIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWVLS-FVLWAPAILFWQFVVGKRTVPDNQCFIQ-----FLSNPAVTFGTAIAAFYLPVVIMTVLYIHISLASRSRVHKHRPEGPKEKKAKTLAFLKSPLMKQSVKKPPPGEAAREELRNGKLEEAPPPALPPPPRPVADKDTSNESSSGSATQNTKERPATELSTTEATTPAMPAPPLQPRALNPASRWSKIQIVTKQTGNECVTAIEIVPATPAGMRPAANVARKFASIARNQVRKKRQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVWSIGYWLCYVNSTINPACYALCNA-TFKKTFRHLLLCQYRNIGTAR |
| 3P0G Chain:A ((31-476)) | ------------------------DVTQQRDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAI---NCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIY--CRSPDFRIAFQELLCLRR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249540 for 2002 contacts (-124.6/contact) +
2D Compatibility (PS) -26588 + (NN) 1303 + (LL) 10068
1D Compatibility (HY) -30800 + (ID) 4250
Total energy: -299807.0 ( -149.75 by residue)
QMean score : 0.290
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