Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGAL-QGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAAR-GPERRRALRVVVALVAAFVVLQL----PYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSLSWDN |
| 4RWA Chain:A ((132-406)) | --------------------------------------------------VCAVGLLGNVLVM-FGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF-RTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSP-SWYWDTVTKICVFLFAFVVPILIITVCYGLMLL------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWT---LVDIDRRDPLVV---AALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173254 for 1929 contacts (-89.8/contact) +
2D Compatibility (PS) -27759 + (NN) -16286 + (LL) 4160
1D Compatibility (HY) -27200 + (ID) 3800
Total energy: -244139.0 ( -126.56 by residue)
QMean score : 0.322
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