Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPF---------WAHAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLY-----VQMRKTLRFREQRYSL---FKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNL-DKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 4RWA Chain:A ((125-406)) | ----------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPF--GELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLI-NICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQ----FPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL-------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHI------FVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFK----RCFRQLC------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239177 for 1905 contacts (-125.6/contact) +
2D Compatibility (PS) -25607 + (NN) -8012 + (LL) 5712
1D Compatibility (HY) -29600 + (ID) 3650
Total energy: -300334.0 ( -157.66 by residue)
QMean score : 0.319
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