Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQEKMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGV--TASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLL--GWNCEKLQSV-------CSDIFPH----IDETYLMFWIGVTSVLLLFIVYAYMYILWKAHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSM-FPSCEGTAQPLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL |
| 3ZPR Chain:A ((5-299)) | -------------------------------------------------------------------------------------------------------------LLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNL-FITSLACADLVVGLLVV-PFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIP-----LLIMIFVALRV-YREAKEQ----------------------MLMREHKA------LKTLGIIMGVFTLCWLPFFLVNIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230323 for 1940 contacts (-118.7/contact) +
2D Compatibility (PS) -26842 + (NN) -8949 + (LL) 12984
1D Compatibility (HY) -32400 + (ID) 4000
Total energy: -289530.0 ( -149.24 by residue)
QMean score : 0.283
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