Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METNFSIPLNETEEVLPEPAGHTVLWIFSLLVHGVTFVFGVLGNGLVIWVAGFRMT-RTVNTICYLNLALADFSFSAILPFRMVSVAMREKWPFGSFLCKLVHVMIDINLFVSVYLITIIALDRCICVLHPAWAQNHRTMSLAKRVMTGLWIFTIVLTLPNFIFWTTISTTNGDTYCIFNFAFWGDTAVERLNVFITMAKVFLILHFIIGFSVPMSIITVCYGIIAAKIHRNHMIKSSRPLRVFAAVVASFFICWFPYELI----GILMAVWLK---EMLLNGKYKIILVLINPTSSLAFFNSCLNPILYVFMGRNFQERLIRSLPTSLERALTEVPDSAQTSNTDTTSASPPEETELQAM |
4XT3 Chain:A ((44-310)) | ----------------------------TLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQY--LLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMV-----VTKKDNQCMTDYDYLEVSYPIILNVELMLG----------AFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALIL-----TESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241527 for 1885 contacts (-128.1/contact) +
2D Compatibility (PS) -25709 + (NN) -2563 + (LL) 6580
1D Compatibility (HY) -32800 + (ID) 4300
Total energy: -300319.0 ( -159.32 by residue)
QMean score : 0.197
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