Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESSFSFGVILAVLASLIIATNTLVAVAVLLLIHKNDGVSLCFTLNLAVADTLIGVAISGLLTDQLSSPSRPTQKTLCSLRMAFVTSSAAASVLTVMLITFDRYLAIKQPFRYLKIMSGFVAGACIAGLWLVSYLIGFLPLGIPMFQQTAYK--------GQCSFFAVFHPHFVLTLSCVGFFPAMLLFVFFYCDMLKIASMHSQQIRKMEHAGAMAGGYRSPRT--PSDFKALRTVSVLIGSFALSWTPFLITGIVQVACQECHLYLVLERYLWLLGVGNSLLNPLIYAYWQKEVRLQLYHMALGVKKVLTSFLLFLSARNCGPERPRESSCHIVTISSSEFDG |
3ZPR Chain:A ((15-285)) | -------SLLMALVVLLIVAGNVLV-IAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDF--VTNRAYAIASSIISFYIPLLIMIFV---ALRVYREAKEQ-------------------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIYCRSPDFRKAFKRLL------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230514 for 1834 contacts (-125.7/contact) +
2D Compatibility (PS) -25089 + (NN) -10893 + (LL) 5744
1D Compatibility (HY) -28000 + (ID) 3600
Total energy: -292352.0 ( -159.41 by residue)
QMean score : 0.389
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