Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAAAFADSNSSSMNVSFAHLHFAGGYLPSDSQDWRTIIPALLVAVCLVGFVGNLCVIGILLHNAWKGKPSMIHSLILNLSLADLSLLLFSAPIRATAYSKSVWDLGWFVCKSSDWFIHTCMAAKSLTIVVVAKVCFMYASDPAKQVSIHNYTIWSVLVA-IWTVASLLPLPEWFFSTIRHHEGVEMCLVDVPAVAEEFMSM-FGKLYPLLAFGLPLFFASFYFWRAYDQCKK-RGTKTQNLRNQIRSKQVTVMLLSIAI-ISALLWLPEWVAWLWVWHLKAAGPAPPQGFIALSQVLMFSISSANPLIFLVMSEEFREGLKGVWKWMITKKPPTVSESQETPAGNSEGLPDKVPSPESPASIPEKEKPSSPSSGKGKTEKAEIPILPDVEQFWHERDTVPSVQDNDPIPWEHEDQETGEGVK |
2Y01 Chain:A ((7-296)) | -------------------------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAI--GSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-------SRVMLMREHKALKTLGIIMGVFTLCWLPFFL--VNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIY-CRSPDFRKAFKRLLA------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215536 for 2033 contacts (-106.0/contact) +
2D Compatibility (PS) -28179 + (NN) -10443 + (LL) 5408
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -275800.0 ( -135.66 by residue)
QMean score : 0.283
|
|
|