Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLNSSLSCRKELSNLTEEEGGEGGVIITQFIAIIVITIFVCLGNLVIVVTLYKKSYLLTLSNKFVFSLTLSNFLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLISSASMLTLGVIAIDRYYAVLYPMVYPMKITGNRAVMALVYIW-LHSLIGCLPPLFGWSSVEFDEFKWMCVAAWHREPG---------YTAFWQIWCALFPFLVMLVCYGFIFRVARVKARKVHCGTVVIVEEDAQRTGRKNSSTSTSSSGSRRNAFQGVVYSANQCKALITILVVLGAFMVTWGPYMVVIASEALWGKSSVSPSLETWATWLSFASAVCHPLIYGLWNKTVRKELLGMCFGDRYYREPFVQRQRTSRLFSISNRITDLGLSPHLTALMAGGQPLGHSSSTGDTGFSCSQDSGTDMMLLEDYTSDDNPPSHCTCPPKRRSSVTFEDEVEQIKEAAKNSILHVKAEVHKSLDSYAASLAKAIEAEAKINLFGEEALPGVLVTARTVPGGGFGGRRGSRTLVSQRLQLQSIEEGDVLAAEQR
4AMJ Chain:A ((20-285))-----------------------------------LVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDE-DPQALKC----YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ------------------------SR---------------VMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVN-VFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -242289 for 1751 contacts (-138.4/contact) +
2D Compatibility (PS) -24521 + (NN) -5892 + (LL) 15004
1D Compatibility (HY) -26800 + (ID) 3650
Total energy: -288148.0 ( -164.56 by residue)
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4AMJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMJ-query.scw
PDB file : Tito_Scwrl_4AMJ.pdb: