Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVF---AITLDRYDISVKP--ANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKT------LLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHEATDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPISVLNT-TILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFT----RQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSEIREKCLVPQVVTD |
| 4UHR Chain:A ((18-310)) | ----------------------------------------------------VLAILGNVLVCWAVWLNSNLQN-VTNYFVVSAAAADILVGVLAIPFAIAI---STGFCAACHGCLFIAC--FVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWN----NCGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFN-------FFACVLVPLL--------LMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKE---------VHAAKSLAI-------------------------IVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210973 for 2063 contacts (-102.3/contact) +
2D Compatibility (PS) -27301 + (NN) 394 + (LL) 11920
1D Compatibility (HY) -26000 + (ID) 3850
Total energy: -255810.0 ( -124.00 by residue)
QMean score : 0.150
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