Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNGSCCRIEGDTISQVMPPLLIVAFVLGALGNGVALCGFCFHMKTWKPSTVYLFNLAVADFLL-MICLPFRTDYYLRRRHWAFGDIPCRVGLFTLAMNRAGSIVFLTVVAADRYFKVVHPHHAVNTISTRVAAGIVCTLWALVILGTVYLLLENHL--CVQETAVSCES------FIMESANGWHDIMFQLEFFMPLGIILFCSFKIVWSLRRRQQLARQARMK--KATRFIMVVAIVFITCYLPSVSARLYFLWTVPSSACDPSVHGALHITLSFT-YMNSMLDPLVYYFSSPSFPKFYNK---LKICSLKPKQPGHSKTQRPEEMPISNLGRRSCISVANSFQSQSDGQWDPHIVEWH |
| 4GBR Chain:A ((10-286)) | ----------------IVMSLIVLAIVFG---NVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKT-WTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGL-TSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSI--VSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLP------FFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227266 for 1906 contacts (-119.2/contact) +
2D Compatibility (PS) -25983 + (NN) 296 + (LL) 3960
1D Compatibility (HY) -24400 + (ID) 3250
Total energy: -276643.0 ( -145.14 by residue)
QMean score : 0.174
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