Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVQGSQRRLLGSLNSTPTAIPQLGLAANQTGARCLEVSISDGLFLSLGLVSLV---ENALVVATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGA-LVARAAVLQ-----QLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVVFSTLFIA--------------YYDH----------VAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRP--VHQGFGLKGAVTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALIICNAIIDPLIYAFHSQELRRTLKEVLTCSW |
| 3ZPR Chain:A ((2-299)) | -------------------------------GAELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG---------LLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLC---VIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVA-LRVYREAKEQ-------------MLMREHKALK---TLGIIMGVFTLCWLPFFL-VNIVNVFNRDLVPDWLFVAFNW---LGYANSAMNPIIYC-RSPDFRKAFKRLL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278342 for 1790 contacts (-155.5/contact) +
2D Compatibility (PS) -25807 + (NN) -14176 + (LL) 4696
1D Compatibility (HY) -31200 + (ID) 4150
Total energy: -348979.0 ( -194.96 by residue)
QMean score : 0.243
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