Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTCDIVTEANISSGPESNTTGI--TAFSMPS------WQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTVTNYFIVNLALADLCMAAFNAAFNFVYAS-HNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQP-RLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQGAT-KCVVAW---PEDSGGKTLLLYHLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLRHLQAMKKFVKTMVLVVLTFAICWLPY-HLYFILGSFQEDIYCHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTKEDKLELTPTTSLSTRVNRCHTKETLFMAGDTAPSEATSGEAGRPQDGSGLWFGYGLLAPTKTHVEI |
3PXO Chain:A ((12-326)) | ---------------PFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM-VFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFII---PLIVIFFCYGQLVFTVKEAA--AQQQESATTQ--KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMT---IPAFF-AKTSAVYNPVIYIMMNKQFRNCMVTTL-CC-GKN--------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -303088 for 2275 contacts (-133.2/contact) +
2D Compatibility (PS) -31778 + (NN) -18327 + (LL) 4940
1D Compatibility (HY) -34000 + (ID) 4350
Total energy: -386603.0 ( -169.94 by residue)
QMean score : 0.283
|
|
|