Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSTLFSQVENHSVHSNFSEKNAQLLA-FENDDCHLPLAMIFTLALAYG-AVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINP-RGWRPNNRHAYVGIAVIWVLAVASSLPFLI-YQVMTDEPFQ-NVTLDAYKDKYVCFDQFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNNMMDKMRDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFL-LCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASPVAFKKINNNDDNEKI |
| 3PQR Chain:A ((1-326)) | MNGT-----EGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPH--------EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTR---MVIIMVIAFLICWLPYAGV-AFYIFTHQ---GSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQF-RNCMVTTLCCGKN------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -250742 for 2533 contacts (-99.0/contact) +
2D Compatibility (PS) -32813 + (NN) -6645 + (LL) 4208
1D Compatibility (HY) -36400 + (ID) 4300
Total energy: -326692.0 ( -128.97 by residue)
QMean score : 0.211
|
|
|