Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRNGSIVTEFILVGFQQSSTSTRALLFALFLALYSLTMAMNGLIIFITSWTDPKLNSPMYFFLGHLSLLDVCFITTTIP---QMLIHLVVRDHIVSFVCCMTQMYFVFCVGVAECILLAFMAYDRYVAICYPLNYVPIISQKVCVRLVGTAWFFGLINGI--FLEYISFREPFRRDNHIESFFCEAPIVIGLSCGDPQFSLWAIFADAI-----------VVILSPMVLTVTSYVHI-------LATILSKASSSGRGKTFST----CASHLTVVIFLYTSAM--------FSYMNPHSTHGPDKDKPFSLLYTIITPMCNPIIYSFRNKEIKEAMVRALGRTRLAQPQSV |
| 2YDV Chain:A ((14-312)) | -------------------------------LAIAVLAILGNVLVCWAV-WLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIAC-----FVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQ------------GCGEGQVA--CLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQ--------STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTF-RKIIRSHVLRQQEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252966 for 1845 contacts (-137.1/contact) +
2D Compatibility (PS) -25956 + (NN) -8539 + (LL) 4920
1D Compatibility (HY) -24400 + (ID) 2950
Total energy: -309891.0 ( -167.96 by residue)
QMean score : 0.228
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