Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLANQTLGGDFFLLGIFSQISHPGRLCLLIFSIFLMAVSWNITLILLIHIDSSLHTPMYFFINQLSLIDLTYISVTVPKMLVNQLAKDKTISVLGCGTQMYFYLQLGG--------AECCLLAAMAYDRYVAICHPLRYSVLMSHRVCLLLASGCWFVGSVDGFMLTPIAMSFPFCRSHEIQHFFC-EVPAVLKLSCSDTSLYKIFMYLCCVIMLLIPVTV-ISVS---YYYIILTIHKMNSVEGRK------KAFTTCSSHITVVSLFYGAAIYNYMLPSSYQTPEKDMMSSFFYTIL------TPVLNPIIYSFRNKDVTRALKKMLSVQKPPY |
| 3ZPR Chain:A ((5-299)) | ----------------LLSQQWEAG-MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPF--------GATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMMH--WWRDEDPQALKCYQDPG-----CCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------MLMREHKALKTLGIIMGVFTLCW----LPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212107 for 1770 contacts (-119.8/contact) +
2D Compatibility (PS) -25185 + (NN) -2252 + (LL) 4132
1D Compatibility (HY) -22000 + (ID) 3550
Total energy: -260962.0 ( -147.44 by residue)
QMean score : 0.066
|
|
|