Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGENHSVVSEFLFLGLTHSWEIQLLLLVFSSVLYVASITGNIFIVFSVTTDPHLHSPMYFLLASLSFIDL----GACSVTSPKMIYDLFRKRKVISFGGCIAQIFFIHVIGGVEMVLLIAMAFDRYVALCKPLHYLTIMSPRMCLSFLAVAWTLGVSHSLFQLAFLVNLAF-CGPNVLDSFYCDLPRLLRLACTDTYRLQFMVTVNSGFIC---VGTFFILLI----SYVFILFTVWKHSSGGSSKALSTLSAHSTVV--------------LLFFGPPMFVYTRPHPNSQMDK-FLAI--FDAVLTPFLNPVVYTFRNKEMKAAIKRVCKQLVIYKKIS |
4PXF Chain:A ((31-314)) | ----------------LAEPWQFSMLA-AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTT----LYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS----------------NFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTV-KEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT--HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203400 for 1841 contacts (-110.5/contact) +
2D Compatibility (PS) -24974 + (NN) -946 + (LL) 3676
1D Compatibility (HY) -24000 + (ID) 3450
Total energy: -253094.0 ( -137.48 by residue)
QMean score : 0.099
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