Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRMSTSNHTQFHPSSFLLLGIPGLEDVHIWIGVPFFFVYLVALLGNTALLFVIQTEQSLHEPMYYFLAMLDSIDLGLSTATIPKMLGIFWFNTKEISFG------GCLSHMFFIHFFTAMESIVLVAMAFDRYIAICKPLRYTMILT-SKIISLIAGIAVLRSLYMVVPLVFLLLRLPFCGHRIIPHTYCEHMGIARLAC---ASIKVNIRFGLGNISLLLLDVILIILSYVRILYAVF---------CLPSWEAR--LKALNTCGSHIGVILAFFTPAF--------FSFLTHRFGHNIP---QYIHIILANLYVVVPPALNPVIYGVRTKQIRERVLRIFLKTNH |
| 3REY Chain:A ((16-302)) | ---------------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTP----MLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHA-PLWLMYLAIVLAHTNSVV----NPFIYAYRIREFRQTFRKIIRS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247908 for 1844 contacts (-134.4/contact) +
2D Compatibility (PS) -24975 + (NN) -4917 + (LL) 4656
1D Compatibility (HY) -24800 + (ID) 3700
Total energy: -301644.0 ( -163.58 by residue)
QMean score : 0.187
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