Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPRNQTSASQFILLGLSEKPEQETLLFSLFFCMYLVMVVGNLLIILAISIDSHLHTPMYFFLANLSLVDFCLA-TNTIPKMLVSLQTGSKAISYPCCLIQMYFFHFFGIVDSVIIAMMAYDRFVAICHPLHYAKIMSLRLCRLLVGALWAFSCFISLTHILLMARLVFCGSHEVPHYFCD--LTPILRLSCTDTSVNRIFILIVAGMVIATPF-----VCILASYARILVAIMKVPSAGGRKKAFSTCSSH--LSVVALFYGTTIGVYLCPSSV---------LTTVKEKASA--VMYTAVTPMLNPFIYSLRNRDLKGALRKLVNRKITSSS |
| 2ZIY Chain:A ((64-327)) | ------------------------------------------------------LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGW------GAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187100 for 1722 contacts (-108.7/contact) +
2D Compatibility (PS) -23951 + (NN) 630 + (LL) 5804
1D Compatibility (HY) -19600 + (ID) 2950
Total energy: -227167.0 ( -131.92 by residue)
QMean score : 0.215
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