Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMYFFLTNLSILDL-----CYTTT--TVPH---MLVNIGCNKKTISYAGCVAHLIIFLALGATECLL-LAVMSFDRYVAVCRPLHYVVIMNYWFCLRMA----AFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCEVPALLKLSCA-------DTKPIEAELFFFSVLILLIPVTLILISYGFIAQAVLKIRSAEGRQKAFGTCG------SHMIVVSL---------FYGTAIYMYLQPPSSTSKDWGKM---VSLFYGIITSMLNSLIYSLRNKDMKEAFKRLMPRIFFCKK |
3PQR Chain:A ((44-315)) | --------------------------MFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG-----------FFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF----THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166440 for 1571 contacts (-105.9/contact) +
2D Compatibility (PS) -23474 + (NN) -8512 + (LL) 5504
1D Compatibility (HY) -27200 + (ID) 3350
Total energy: -223472.0 ( -142.25 by residue)
QMean score : 0.143
|
|
|