Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGTDNQTWVSEFILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLAL----GGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLLMTPFCLV----LLSYIQIISTILKIQSREGRK------KAFHTCASHLTVVALCYGVAIFTYIQPHSSPSVLQEKLFSVF----YAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT |
3ZPR Chain:A ((6-299)) | ----------------LSQQWEAGMSLLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIE--TLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA--NSAMNPIIYC-RSPDFRKAFKRLL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206307 for 1867 contacts (-110.5/contact) +
2D Compatibility (PS) -26596 + (NN) -9538 + (LL) 4372
1D Compatibility (HY) -26800 + (ID) 3700
Total energy: -268569.0 ( -143.85 by residue)
QMean score : 0.206
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