Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVWENQTFNSIFILLGIFNHSPTHTFLFSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSYLSGKKSISLAGCGTQIFFYVSLLGAECFL--LAVMAYDRYVAICHPLQYTILMNPKLCVFMTVASWTLGSLDGIIVLAAVLSFSYCSSL-EIHHFFCDVAALLPLSCTETSAFERLLVICCVVMLIFPVSVIILSYSHVLRAVIHMGSGESRRKAFTTCSSHLSVVGL--------------YYGAAMFMYMRPASKHTPDQDKMVSAFYTILTPMLNPLIYSLRNKEVFRALQKVLKKRKLI |
| 2I36 Chain:A ((66-314)) | ----------------------------------------------------KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMA-----LACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESF---VIYMFVVHFIIPLIVIFFCYGQLVFTVKE--AAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQ-FRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185798 for 1641 contacts (-113.2/contact) +
2D Compatibility (PS) -23599 + (NN) -5662 + (LL) 6336
1D Compatibility (HY) -20400 + (ID) 3000
Total energy: -232123.0 ( -141.45 by residue)
QMean score : 0.155
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