Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLMEPEAGTNRTAVAEFILLGLVQTEEMQPVVFVLLLFAYLVTTGGNLSILAAVLVEPKLHAPMYFFLGNLSVLDVGCITVTVPAMLGRLLSHKSTISYDACLSQLFFFHLLAGMDCFLLTA-------MAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAFTNALTHTVAMSTLNFCGPNEVNHFYCDLPQLFQL----SCSSTQLNELLLFAVGFIMAGTPLVLII----TAYSHVAAAVLRIRSVEGRK--------KAFSTCGSHLTVVCL----FFGRGIFNYMRLGSEEASDKDKGVGVFNTV--INPMLNPLIYSLRNPDVQGALWQIFLGRRSLT |
| 2YCY Chain:A ((10-292)) | -------------------------------WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELW-----TSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICT------------VWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF----NRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147570 for 1696 contacts (-87.0/contact) +
2D Compatibility (PS) -25126 + (NN) -6813 + (LL) 6304
1D Compatibility (HY) -23200 + (ID) 3350
Total energy: -199755.0 ( -117.78 by residue)
QMean score : 0.182
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