Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPQNTTQVSMFVLLGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLMISNSGL------------LVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHIIVVSMIFIPC--------IYIYTWP---FTPFLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMRRLGKCLVICRE |
| 4BEZ Chain:A ((47-318)) | -----------------------------MFLLIMLGFPINFLTLYVTVQHK-KLRTPLNYILLNLAVADLFMVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWV---------MALA-----CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFM--TIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231715 for 1899 contacts (-122.0/contact) +
2D Compatibility (PS) -24914 + (NN) -3039 + (LL) 4176
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -259692.0 ( -136.75 by residue)
QMean score : 0.125
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