Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTGNWSQVAEFIILGFPHLQGVQIYLFLLLLLIYLMTVLGNLLIFLVVCLDSRLHTPMYHFVSILSFSELGYTAATIPKMLANLLSEKKTISFSGCLLQIYFFHSLGATECYLLTAMAYDRYLAICRPLHYPTLMTPTLCAEIAIGCWLGGLA---GPVVEISLISRLPFCGPNRIQ-----HVFCDFPPVLSLACTDTSINVLVDFVINSCKILATFLLILCSYVQIICTVLRIPSAAGKRKAISTCASHFTVVLIFYGSILSMYVQLKKSYSLDYDQALAVVYSVLTPFLNPFIYSLRNKEIKEAVRRQLKRIGILA
3QAK Chain:A ((18-221))-------------------IMGSSVYI-TVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP--FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCG----------QGCGEGQVACLFEDVVPM-------NYMVYFNFFAC-VLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKL


General information:
TITO was launched using:
RESULT:

Template: 3QAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193323 for 1277 contacts (-151.4/contact) +
2D Compatibility (PS) -18744 + (NN) -5386 + (LL) 2308
1D Compatibility (HY) -22800 + (ID) 2950
Total energy: -240895.0 ( -188.64 by residue)
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_3QAK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QAK-query.scw
PDB file : Tito_Scwrl_3QAK.pdb: