Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGTKLEDSPPCRNWSSASELNETQEPFLNPTDYDDEEFLRYLWREYLHPKEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVI--IWIVSCIIMI------------PQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTKSRMSAVAAEIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAW-FTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDRLTRGRTSTESRKSLTTQISNFDNISKLSEQVVLTSISTLPAANGAGPLQNW |
3ZPR Chain:A ((16-296)) | --------------------------------------------------------LLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA--LKCYQD-PGCCDFVT--------------NRAYAIASSIISFYIPLLIMIFVALRVYR---------------------EAKEQ--------------------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIV--------NVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228902 for 1873 contacts (-122.2/contact) +
2D Compatibility (PS) -25536 + (NN) -6009 + (LL) 11688
1D Compatibility (HY) -30400 + (ID) 4400
Total energy: -283559.0 ( -151.39 by residue)
QMean score : 0.276
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