Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEVLWPAVPNGTDAAFLAGPGSSWGNSTVASTAAVSSSFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKDLDNSPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKASRRSEANLQSKSEDMTLNILPEFKQNGDTSL |
4XT3 Chain:A ((47-310)) | --------------------------------------------------------LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH-----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-----MRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTK-KDNQCMTDYDYLEVSYP---IILNVELMLGAFVIPLSVISYCYYRISRIVA---VSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSS-CEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250961 for 1957 contacts (-128.2/contact) +
2D Compatibility (PS) -26234 + (NN) -4111 + (LL) 6464
1D Compatibility (HY) -30800 + (ID) 3750
Total energy: -309392.0 ( -158.10 by residue)
QMean score : 0.320
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