Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDP-GCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWC-----FLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH---VYHGQEAAQQRPRDSEVEM----MAQLLGIMVVAS-VCWLP-----LLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
3C9M Chain:A ((49-311)) | -----------------------------------MLGFPINFLTLYVTVQHKK----LRTPLNYILLNLAVADLF--MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVV---LAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFV-------VHFIIPLI-VIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTS--------------AVYNPVIYIMMNKQFRNCMVTTLCCGKNP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181115 for 1786 contacts (-101.4/contact) +
2D Compatibility (PS) -25226 + (NN) -13553 + (LL) 4308
1D Compatibility (HY) -27600 + (ID) 3250
Total energy: -246436.0 ( -137.98 by residue)
QMean score : 0.242
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