Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNE-HGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLSL----PGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDYGQLGVQALENQATGQGICIAFKDIMPFSAQVGDERMQ----CLMRHLAQA-GATVVVVFSSRQLARVFFESVVLTNLTGKVWVASEAWALSRHITGVPGIQRIGMVLGVAIQKRAVPGLKAFEEAYARADKKAPRPCHKGSW----------CS---SNQLCRECQAFMAHTMPKLKAFSMSSAYNAYRAVYAVAHGLHQL----------LGCASGACSRGRVYPWQLLEQIHKVHFLLHKDT---VAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSDLYRCQPCGKEEWAPEGSQTCFPRTVVFLALREHTSWVLLAANTLLLLLLLGTAGLFAWHLDTPVVRSAGGRLCFLMLGSLAAGSGSLYGFFGEPTRPACLLRQALFALGFTIFLSCLTVRSFQLIIIFKFSTKVPTFYHAWVQNHGAGLFVMISSAAQLLICLTWLVVWTPLPAREYQRFPHLVMLECTETNSLGFILAFLYNGLLSISAFACSYLGKDLPENYNEAKCVTFSLLFNFVSWIAFFTTASVYDGKYLPAANMMAGLSSLSSGFGGYFLPKCYVILCRPDLNSTEHFQASIQDYTRRCGST |
| 3SM9 Chain:A ((7-474)) | ------------------------------EIKIEGDLVLGGLFPINEKGT-TEE------CGR---INEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCS--RDTYALEQSLEFVRAS-----------LL-----IAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNISIA------TAEKVGR--IRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASF-TWVASDGWGAQESI--IKGSEHVA--YGAITLELASQPVRQFDRYFQSLN---PYNNHRNPWFRDFWEQKFQCSLQN---HRRVCDKHLAIDSSNYE--QESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAMKILDGKKLYKDYLLKINFTAPFN-----DSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGH--WAET-LSLDVNSIHWS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -345389 for 3392 contacts (-101.8/contact) +
2D Compatibility (PS) -42501 + (NN) -13808 + (LL) 29680
1D Compatibility (HY) -26000 + (ID) 6450
Total energy: -404468.0 ( -119.24 by residue)
QMean score : 0.510
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