Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRVLSEDKKVACIVTDLQVCLSALETPI--PPSAECCKNLKIQK-SCLCDYMENPSIEKY-LEP--ARKVFAACGMPYP-RC
2RKN Chain:A ((9-77))
-------------QDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26131 for 357 contacts (-73.2/contact) +
2D Compatibility (PS) -6197 + (NN) -3017 + (LL) 1368
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -38477.0 ( -107.78 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: