Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVVGGWGIEEKAACIVTNLMSCLPAILKGSQPPAYCCEMLKE-----------QQSCLCGYIKSPTFGHYVIPQNAHKLLAACGILYPKC
1BWO Chain:A ((7-78))
---------------DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33641 for 369 contacts (-91.2/contact) +
2D Compatibility (PS) -6070 + (NN) 85 + (LL) 1264
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -40312.0 ( -109.25 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: