Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TEVKLSGGEADVTCD--AVQLSSCATPMLTGV--PPSTECCGKLKEQQ-PCFCTYIKDPRYSQY-VGSANAKKTLATCGVPYP-TC
2RKN Chain:A ((4-77))
------------LCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17018 for 409 contacts (-41.6/contact) +
2D Compatibility (PS) -6857 + (NN) -4803 + (LL) 580
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -33398.0 ( -81.66 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: