Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APRGAHGAGECGRTPADEMALKLAPCASAGQDPNSAPSSGCCTAVRTIGK---Q----SPKCLCAVMLSDTAKSA-GIKPEAAISIPKRCNLVDRPVGYKCGAYTLP
1BWO Chain:A ((2-78))
--------------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR---GIHNLNEDNARSIPPKCGVNLP------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19463 for 442 contacts (-44.0/contact) +
2D Compatibility (PS) -7276 + (NN) -5054 + (LL) 484
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -35309.0 ( -79.88 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: