Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQ--------NPKCLCAILLSDTAKAS-GVDPEVALTIPKRCNFANRPVGYKCGAYTLP
1AFH Chain:A ((3-80))
-------SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNA-AAGVSGLNAGNAASIPSKCGVSIP------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15775 for 497 contacts (-31.7/contact) +
2D Compatibility (PS) -7122 + (NN) -2560 + (LL) 676
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -28531.0 ( -57.41 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: